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Yanxun Xu
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Year
Pan-cancer analysis of whole genomes
Nature 578 (7793), 82-93, 2020
17552020
A community effort to assess and improve drug sensitivity prediction algorithms
JC Costello, LM Heiser, E Georgii, M Gönen, MP Menden, NJ Wang, ...
Nature biotechnology 32 (12), 1202-1212, 2014
7982014
Comprehensive molecular characterization of mitochondrial genomes in human cancers
Y Yuan, YS Ju, Y Kim, J Li, Y Wang, CJ Yoon, Y Yang, I Martincorena, ...
Nature genetics 52 (3), 342-352, 2020
3442020
Comprehensive Characterization of Molecular Differences in Cancer between Male and Female Patients
Y Yuan, L Liu, H Chen, Y Wang, Y Xu, H Mao, J Li, GB Mills, Y Shu, L Li, ...
Cancer Cell 29 (5), 711-722, 2016
3182016
Assessing the clinical utility of cancer genomic and proteomic data across tumor types
Y Yuan, EM Van Allen, L Omberg, N Wagle, A Amin-Mansour, A Sokolov, ...
Nature biotechnology 32 (7), 644-652, 2014
3172014
Enter the matrix: factorization uncovers knowledge from omics
GL Stein-O’Brien, R Arora, AC Culhane, AV Favorov, LX Garmire, ...
Trends in Genetics 34 (10), 790-805, 2018
2422018
Racial and ethnic discrepancy in pulse oximetry and delayed identification of treatment eligibility among patients with COVID-19
A Fawzy, TD Wu, K Wang, ML Robinson, J Farha, A Bradke, SH Golden, ...
JAMA internal medicine 182 (7), 730-738, 2022
2302022
TCGA-assembler 2: software pipeline for retrieval and processing of TCGA/CPTAC data
L Wei, Z Jin, S Yang, Y Xu, Y Zhu, Y Ji
Bioinformatics 34 (9), 1615-1617, 2018
2192018
The Pan-Cancer analysis of pseudogene expression reveals biologically and clinically relevant tumour subtypes
L Han, Y Yuan, S Zheng, Y Yang, J Li, ME Edgerton, L Diao, Y Xu, ...
Nature communications 5 (1), 3963, 2014
1632014
Comparison of Time to Clinical Improvement With vs Without Remdesivir Treatment in Hospitalized Patients With COVID-19
BT Garibaldi, K Wang, ML Robinson, SL Zeger, K Bandeen-Roche, ...
JAMA Network Open 4 (3), e213071-e213071, 2021
1622021
Prediction of lung cancer risk at follow-up screening with low-dose CT: a training and validation study of a deep learning method
P Huang, CT Lin, Y Li, MC Tammemagi, MV Brock, S Atkar-Khattra, Y Xu, ...
The Lancet Digital Health 1 (7), e353-e362, 2019
1402019
Multivariate relationships between peripheral inflammatory marker subtypes and cognitive and brain structural measures in psychosis
P Lizano, O Lutz, Y Xu, LH Rubin, L Paskowitz, AM Lee, S Eum, SK Keedy, ...
Molecular psychiatry 26 (7), 3430-3443, 2021
982021
Bayesian nonparametric estimation for dynamic treatment regimes with sequential transition times
Y Xu, P Müller, AS Wahed, PF Thall
Journal of the American Statistical Association 111 (515), 921-950, 2016
962016
Sex differences in neurocognitive function in adults with HIV: patterns, predictors, and mechanisms
LH Rubin, GN Neigh, EE Sundermann, Y Xu, EP Scully, PM Maki
Current psychiatry reports 21, 1-12, 2019
732019
A Bayesian Nonparametric Approach for Estimating Individualized Treatment-Response Curves
Y Xu, Y Xu, S Saria
Machine Learning for Healthcare Conference, 282-300, 2016
722016
Real-World Effectiveness of Remdesivir in Adults Hospitalized With Coronavirus Disease 2019 (COVID-19): A Retrospective, Multicenter Comparative Effectiveness Study
BT Garibaldi, K Wang, ML Robinson, J Betz, G Caleb Alexander, ...
Clinical Infectious Diseases 75 (1), e516-e524, 2022
62*2022
Development of severe COVID-19 adaptive risk predictor (SCARP), a calculator to predict severe disease or death in hospitalized patients with COVID-19
S Wongvibulsin, BT Garibaldi, AAR Antar, J Wen, MC Wang, A Gupta, ...
Annals of internal medicine 174 (6), 777-785, 2021
582021
Subgroup-based adaptive (SUBA) designs for multi-arm biomarker trials
Y Xu, L Trippa, P Müller, Y Ji
Statistics in Biosciences 8, 159-180, 2016
582016
Bayesian repulsive gaussian mixture model
F Xie, Y Xu
Journal of the American Statistical Association 115 (529), 187-203, 2020
522020
Bayesian inference for latent biologic structure with determinantal point processes (DPP)
Y Xu, P Müller, D Telesca
Biometrics 72 (3), 955-964, 2016
492016
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Articles 1–20